
# https://matplotlib.org/devdocs/gallery/lines_bars_and_markers/simple_plot.html

import matplotlib.pyplot as plt
import numpy as np

# Data for plotting
t = np.arange(0.0, 2.0, 0.01)
s = 1 + np.sin(2 * np.pi * t)

fig, ax = plt.subplots()
ax.plot(t, s)

ax.set(xlabel='time (s)', ylabel='voltage (mV)',
       title='About as simple as it gets, folks')
ax.grid()

#fig.savefig("test.png")
plt.show()


#https://matplotlib.org/devdocs/gallery/lines_bars_and_markers/barchart.html#sphx-glr-gallery-lines-bars-and-markers-barchart-py 

import matplotlib.pyplot as plt
import numpy as np

species = ("Adelie", "Chinstrap", "Gentoo")
penguin_means = {
    'Bill Depth': (18.35, 18.43, 14.98),
    'Bill Length': (38.79, 48.83, 47.50),
    'Flipper Length': (189.95, 195.82, 217.19),
}

x = np.arange(len(species))  # the label locations
width = 0.25  # the width of the bars
multiplier = 0

fig, ax = plt.subplots(constrained_layout=True)

for attribute, measurement in penguin_means.items():
    offset = width * multiplier 
    rects = ax.bar(x + offset, measurement, width, label=attribute)
    ax.bar_label(rects, padding=3)
    multiplier += 1

# Add some text for labels, title and custom x-axis tick labels, etc.
ax.set_ylabel('Length (mm)')
ax.set_title('Penguin attributes by species')
ax.set_xticks(x + width, species)
ax.legend(loc='upper left')
ax.set_ylim(0, 250)

plt.show()


np.random.seed(42)
N = 50
x = np.random.rand(N)
y = np.random.rand(N)
colors = np.random.rand(N)
area = (30 * np.random.rand(N))**2  # 0 to 15 point radii
plt.scatter(x, y, s=area, c=colors, alpha=0.5)
plt.show()


# https://matplotlib.org/devdocs/gallery/misc/packed_bubbles.html
    
import numpy as np
import matplotlib.pyplot as plt

browser_market_share = {
    'browsers': ['firefox', 'chrome', 'safari', 'edge', 'ie', 'opera'],
    'market_share': [8.61, 69.55, 8.36, 4.12, 2.76, 2.43],
    'color': ['#5A69AF', '#579E65', '#F9C784', '#FC944A', '#F24C00', '#00B825']
}


class BubbleChart:
    def __init__(self, area, bubble_spacing=0):
        """
        Setup for bubble collapse.

        Parameters
        ----------
        area : array-like
            Area of the bubbles.
        bubble_spacing : float, default: 0
            Minimal spacing between bubbles after collapsing.

        Notes
        -----
        If "area" is sorted, the results might look weird.
        """
        area = np.asarray(area)
        r = np.sqrt(area / np.pi)

        self.bubble_spacing = bubble_spacing
        self.bubbles = np.ones((len(area), 4))
        self.bubbles[:, 2] = r
        self.bubbles[:, 3] = area
        self.maxstep = 2 * self.bubbles[:, 2].max() + self.bubble_spacing
        self.step_dist = self.maxstep / 2

        # calculate initial grid layout for bubbles
        length = np.ceil(np.sqrt(len(self.bubbles)))
        grid = np.arange(length) * self.maxstep
        gx, gy = np.meshgrid(grid, grid)
        self.bubbles[:, 0] = gx.flatten()[:len(self.bubbles)]
        self.bubbles[:, 1] = gy.flatten()[:len(self.bubbles)]

        self.com = self.center_of_mass()

    def center_of_mass(self):
        return np.average(
            self.bubbles[:, :2], axis=0, weights=self.bubbles[:, 3]
        )

    def center_distance(self, bubble, bubbles):
        return np.hypot(bubble[0] - bubbles[:, 0],
                        bubble[1] - bubbles[:, 1])

    def outline_distance(self, bubble, bubbles):
        center_distance = self.center_distance(bubble, bubbles)
        return center_distance - bubble[2] - \
            bubbles[:, 2] - self.bubble_spacing

    def check_collisions(self, bubble, bubbles):
        distance = self.outline_distance(bubble, bubbles)
        return len(distance[distance < 0])

    def collides_with(self, bubble, bubbles):
        distance = self.outline_distance(bubble, bubbles)
        idx_min = np.argmin(distance)
        return idx_min if type(idx_min) == np.ndarray else [idx_min]

    def collapse(self, n_iterations=50):
        """
        Move bubbles to the center of mass.

        Parameters
        ----------
        n_iterations : int, default: 50
            Number of moves to perform.
        """
        for _i in range(n_iterations):
            moves = 0
            for i in range(len(self.bubbles)):
                rest_bub = np.delete(self.bubbles, i, 0)
                # try to move directly towards the center of mass
                # direction vector from bubble to the center of mass
                dir_vec = self.com - self.bubbles[i, :2]

                # shorten direction vector to have length of 1
                dir_vec = dir_vec / np.sqrt(dir_vec.dot(dir_vec))

                # calculate new bubble position
                new_point = self.bubbles[i, :2] + dir_vec * self.step_dist
                new_bubble = np.append(new_point, self.bubbles[i, 2:4])

                # check whether new bubble collides with other bubbles
                if not self.check_collisions(new_bubble, rest_bub):
                    self.bubbles[i, :] = new_bubble
                    self.com = self.center_of_mass()
                    moves += 1
                else:
                    # try to move around a bubble that you collide with
                    # find colliding bubble
                    for colliding in self.collides_with(new_bubble, rest_bub):
                        # calculate direction vector
                        dir_vec = rest_bub[colliding, :2] - self.bubbles[i, :2]
                        dir_vec = dir_vec / np.sqrt(dir_vec.dot(dir_vec))
                        # calculate orthogonal vector
                        orth = np.array([dir_vec[1], -dir_vec[0]])
                        # test which direction to go
                        new_point1 = (self.bubbles[i, :2] + orth *
                                      self.step_dist)
                        new_point2 = (self.bubbles[i, :2] - orth *
                                      self.step_dist)
                        dist1 = self.center_distance(
                            self.com, np.array([new_point1]))
                        dist2 = self.center_distance(
                            self.com, np.array([new_point2]))
                        new_point = new_point1 if dist1 < dist2 else new_point2
                        new_bubble = np.append(new_point, self.bubbles[i, 2:4])
                        if not self.check_collisions(new_bubble, rest_bub):
                            self.bubbles[i, :] = new_bubble
                            self.com = self.center_of_mass()

            if moves / len(self.bubbles) < 0.1:
                self.step_dist = self.step_dist / 2

    def plot(self, ax, labels, colors):
        """
        Draw the bubble plot.

        Parameters
        ----------
        ax : matplotlib.axes.Axes
        labels : list
            Labels of the bubbles.
        colors : list
            Colors of the bubbles.
        """
        for i in range(len(self.bubbles)):
            circ = plt.Circle(
                self.bubbles[i, :2], self.bubbles[i, 2], color=colors[i])
            ax.add_patch(circ)
            ax.text(*self.bubbles[i, :2], labels[i],
                    horizontalalignment='center', verticalalignment='center')


bubble_chart = BubbleChart(area=browser_market_share['market_share'],
                           bubble_spacing=0.1)

bubble_chart.collapse()

fig, ax = plt.subplots(subplot_kw=dict(aspect="equal"))
bubble_chart.plot(
    ax, browser_market_share['browsers'], browser_market_share['color'])
ax.axis("off")
ax.relim()
ax.autoscale_view()
ax.set_title('Browser market share')

plt.show()


# https://plotly.com/python/network-graphs/

import plotly.graph_objects as go

import networkx as nx

G = nx.random_geometric_graph(200, 0.125)

edge_x = []
edge_y = []
for edge in G.edges():
    x0, y0 = G.nodes[edge[0]]['pos']
    x1, y1 = G.nodes[edge[1]]['pos']
    edge_x.append(x0)
    edge_x.append(x1)
    edge_x.append(None)
    edge_y.append(y0)
    edge_y.append(y1)
    edge_y.append(None)

edge_trace = go.Scatter(
    x=edge_x, y=edge_y,
    line=dict(width=0.5, color='#888'),
    hoverinfo='none',
    mode='lines')

node_x = []
node_y = []
for node in G.nodes():
    x, y = G.nodes[node]['pos']
    node_x.append(x)
    node_y.append(y)

node_trace = go.Scatter(
    x=node_x, y=node_y,
    mode='markers',
    hoverinfo='text',
    marker=dict(
        showscale=True,
        # colorscale options
        #'Greys' | 'YlGnBu' | 'Greens' | 'YlOrRd' | 'Bluered' | 'RdBu' |
        #'Reds' | 'Blues' | 'Picnic' | 'Rainbow' | 'Portland' | 'Jet' |
        #'Hot' | 'Blackbody' | 'Earth' | 'Electric' | 'Viridis' |
        colorscale='YlGnBu',
        reversescale=True,
        color=[],
        size=10,
        colorbar=dict(
            thickness=15,
            title='Node Connections',
            xanchor='left',
            titleside='right'
        ),
        line_width=2))

node_adjacencies = []
node_text = []
for node, adjacencies in enumerate(G.adjacency()):
    node_adjacencies.append(len(adjacencies[1]))
    node_text.append('# of connections: '+str(len(adjacencies[1])))

node_trace.marker.color = node_adjacencies
node_trace.text = node_text

fig = go.Figure(data=[edge_trace, node_trace],
             layout=go.Layout(
                title='<br>Network graph made with Python',
                titlefont_size=16,
                showlegend=False,
                hovermode='closest',
                margin=dict(b=20,l=5,r=5,t=40),
                annotations=[ dict(
                    text="Python code: <a href='https://plotly.com/ipython-notebooks/network-graphs/'> https://plotly.com/ipython-notebooks/network-graphs/</a>",
                    showarrow=False,
                    xref="paper", yref="paper",
                    x=0.005, y=-0.002 ) ],
                xaxis=dict(showgrid=False, zeroline=False, showticklabels=False),
                yaxis=dict(showgrid=False, zeroline=False, showticklabels=False))
                )
fig.show()


df = pd.read_csv('https://raw.githubusercontent.com/pandas-dev/pandas/main/pandas/tests/io/data/csv/iris.csv')
pd.plotting.parallel_coordinates(df, 'Name', color=('#556270', '#4ECDC4', '#C7F464'))

<AxesSubplot:>


# https://plotly.com/python/parallel-coordinates-plot/

import plotly.graph_objects as go

import pandas as pd

df = pd.read_csv("https://raw.githubusercontent.com/bcdunbar/datasets/master/parcoords_data.csv")

fig = go.Figure(data=
    go.Parcoords(
        line = dict(color = df['colorVal'],
                   colorscale = 'Electric',
                   showscale = True,
                   cmin = -4000,
                   cmax = -100),
        dimensions = list([
            dict(range = [32000,227900],
                 constraintrange = [100000,150000],
                 label = "Block Height", values = df['blockHeight']),
            dict(range = [0,700000],
                 label = 'Block Width', values = df['blockWidth']),
            dict(tickvals = [0,0.5,1,2,3],
                 ticktext = ['A','AB','B','Y','Z'],
                 label = 'Cyclinder Material', values = df['cycMaterial']),
            dict(range = [-1,4],
                 tickvals = [0,1,2,3],
                 label = 'Block Material', values = df['blockMaterial']),
            dict(range = [134,3154],
                 visible = True,
                 label = 'Total Weight', values = df['totalWeight']),
            dict(range = [9,19984],
                 label = 'Assembly Penalty Wt', values = df['assemblyPW']),
            dict(range = [49000,568000],
                 label = 'Height st Width', values = df['HstW'])])
    )
)
fig.show()


# https://plotly.com/python/treemaps/

import plotly.express as px
fig = px.treemap(
    names = ["Eve","Cain", "Seth", "Enos", "Noam", "Abel", "Awan", "Enoch", "Azura"],
    parents = ["", "Eve", "Eve", "Seth", "Seth", "Eve", "Eve", "Awan", "Eve"]
)
fig.update_traces(root_color="lightgrey")
fig.update_layout(margin = dict(t=50, l=25, r=25, b=25))
fig.show()


# https://plotly.com/python/sunburst-charts/
import plotly.express as px
data = dict(
    character=["Eve", "Cain", "Seth", "Enos", "Noam", "Abel", "Awan", "Enoch", "Azura"],
    parent=["", "Eve", "Eve", "Seth", "Seth", "Eve", "Eve", "Awan", "Eve" ],
    value=[10, 14, 12, 10, 2, 6, 6, 4, 4])

fig = px.sunburst(
    data,
    names='character',
    parents='parent',
    values='value',
)
fig.show()


# https://plotly.com/python/radar-chart/

import plotly.express as px
import pandas as pd
df = pd.DataFrame(dict(
    r=[1, 5, 2, 2, 3],
    theta=['processing cost','mechanical properties','chemical stability',
           'thermal stability', 'device integration']))
fig = px.line_polar(df, r='r', theta='theta', line_close=True)
fig.update_traces(fill='toself')
fig.show()

C:\ProgramData\Anaconda3\lib\site-packages\plotly\express\_core.py:271: FutureWarning:

The frame.append method is deprecated and will be removed from pandas in a future version. Use pandas.concat instead.